Mihaela Martis

Mihaela Martis NBIS expert

transcriptomics, comparative genomics

emailmihaela.martis@nbis.se
phone +46 (0)13 282834

Mihaela received her Dipl.-Bioinf. degree from the Ludwig-Maximilians University (LMU) and Technical University München (TUM), Germany, in 2007. She received her doctoral degree (Dr. rer.nat) from TUM in 2015. During her doctoral studies she focused on the analyses of complex cereal genomes, as well as on the development and implementation of novel strategies to unravel the structure of grass genomes. She has been a member of the research staff at the Plant Genome and Systems Biology (PGSB) at Helmholtz Center Munich for over seven years before joining NBIS bioinformatics short-term support in April 2015. At PGSB she worked among others on whole genome and transcriptome analyses, comparative genomics, and analysis of supernumerary B chromosomes. Within NBIS, Mihaela offers support with the analysis of next generation sequencing data, focussed mainly on analysis of RNA-Seq data.

Selected publications

The International Wheat Genome Sequencing Consortium (2014) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science, 345.

Martis, M. M., Zhou, R., Haseneyer, G., Schmutzer, T., Vrána, J., Kubaláková, M., König, S., Kugler, K. G., Scholz, U., Hackauf, B., Korzun, V., Schön, C. C., Doležel, J., Bauer, E., Mayer, K. F. X., and Stein, N. (2013) Reticulate Evolution of the Rye Genome. Plant Cell, 25, 3685–3698.

Martis, M. M., Klemme, S., Banaei-Moghaddam, A. M., Blattner, F. R., Macas, J., Schmutzer, T., Scholz, U., Gundlach, H., Wicker, T., Šimková, H., Novák, P., Neumann, P., Kubaláková, M., Bauer, E., Haseneyer, G., Fuchs, J., Doležel, J., Stein, N., Mayer, K. F., and Houben, A. (2012) Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences. Proc Natl Acad Sci U S A., 109(33), 13343–6.

Hernandez, P., Martis, M., Dorado, G., Pfeifer, M., Galvez, S., Schaaf, S., Jouve, N., Simkova, H., Valarik, M., Dolezel, J., and Mayer, K. F. X. (2012) Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content. Plant Journal, 69(3), 377–86.

International Barley Genome Sequencing Consortium (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature, 491(7426), 711–6.

Mayer, K. F., Martis, M., Hedley, P. E., Šimková, H., Liu, H., Morris, J. A., Steuernagel, B., Taudien, S., Roessner, S., Gundlach, H., Kubaláková, M., Suchánková, P., Murat, F., Felder, M., Nussbaumer, T., Graner, A., Salse, J., Endo, T., Sakai, H., Tanaka, T., Itoh, T., Sato, K., Platzer, M., Matsumoto, T., Scholz, U., Doležel, J., Waugh, R., and Stein, N. (2011) Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell, 23(4), 1249–63.